PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931176.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 298aa    MW: 33739.3 Da    PI: 8.0693
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931176.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-11106157155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+ + + ++ Lr+l+P++   + ++ + a+i+  Ave++k+L+
  XP_022931176.1 106 QRMTHIAVERNRRKLMSEHLSVLRSLMPES---YVQRGDQASIVGGAVEFVKELE 157
                     79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MSIDALSSND LFNLIIYDAI SPTPNTSHGI CDSSETTFFS DEKGLKHQDN HQHGTLEHRP  60
KPNLARKRHP NEAESSNWGA VGLQQGKKKR KRKPKACKNK EEAETQRMTH IAVERNRRKL  120
MSEHLSVLRS LMPESYVQRG DQASIVGGAV EFVKELEHVL STLEAKKLQI LHQEIEEKQE  180
NYKNEDSVRR RLFSDSNSSQ YSAKSKASSA DIEVTLIETH ANLRILSIRT HRQLLKLIAG  240
LQALRLTILH LNVTDFHPLV LYSISLKVEE GCQLRSVDDI AAAAHEMVRI IEEEGVLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793KKKRKRK
28893KKRKRK
3107118RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.11e-58bHLH family protein