PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931180.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 166aa    MW: 18631.8 Da    PI: 8.6954
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931180.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.32.8e-054365123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_022931180.1 43 YTCNFCRREFKSAQALGGHMNVH 65
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MEGGKHRSMS NGKVVKNEEQ QWGFGKQETF SSDQFLHWPA RKYTCNFCRR EFKSAQALGG  60
HMNVHRRDRG RLRYWSSWMH NNSYPTPSFC LPPPPPSCFS SRPSIENSSL TCIEGSGSCS  120
RSNEGDGDAD VDGVKKKRKK GSVNLEGKMG NLVGCSSEDL DLELHL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136140KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.14e-20C2H2 family protein