PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931312.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 317aa    MW: 34968 Da    PI: 5.4928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931312.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-19107157155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r++lg++ taeeAa  +++a+ +l+g
  XP_022931312.1 107 KKFRGVRQRP-WGKWAAEIRDPL----RrVRVWLGTYNTAEEAAMVYDNAAIQLRG 157
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEPMDLFSSP VLPPIKYTEH RSQTRLVSPP LMTSKVVKIS VMDADATDSS SDDEEQDYAC  60
RRVKKFVNEI TIEASPVKSS RKKSTGGKSK FPAVNRDPLK QQPTGAKKFR GVRQRPWGKW  120
AAEIRDPLRR VRVWLGTYNT AEEAAMVYDN AAIQLRGPTA QTNFIPPPKF SPETAAASSG  180
YVSAEESNEN LSSPTSVLRC PSPSTNDAVS GKTSTTTTGK ENGRDEPDKI SEFSFHSNYD  240
TFFPNDIFDF RPPVPSLFGE TTLNDGFLKG DYGSSMFINP ADDFGFGFGF GLSTWHTVKD  300
SFQDISDIFG SDPLLAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.13e-55ERF family protein