PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931400.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 308aa    MW: 33717 Da    PI: 9.2039
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931400.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-19112162256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  XP_022931400.1 112 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 162
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDNKMRQEQS NSMNLADIRT LLSNLLLSRQ STNTLDSIFS YCLPSAAAAA APVLEPALGS  60
SVYLRQRDLV HQFCVENHHG CSSTNLQHQQ RDHPVGISGG YGGFPGAVKK KLYRGVRQRH  120
WGKWVAEIRL PQNRMRVWLG TYDTAEAAAY AYDRAAYKLR GEYARLNFPN LKDFRNLGFA  180
DCSRLNALKH SVDAKIQAIC LKMKRERGKT SGKKSNPKNG GVSASSSMSS PSPSPASAEW  240
CWRGEMVCSS AAVSEEDGFW RSENSPPVSS SSSGSAVAVA GEGVCEGYSS LAKMPSFDPD  300
LIWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.12e-58ERF family protein