PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931479.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 205aa    MW: 23214.6 Da    PI: 9.9412
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931479.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.79.4e-1973127256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++keq + Lee F+ + +++ ++++ LA++l+L++rqV vWFqNrRa+ k
  XP_022931479.1  73 RKKLRLSKEQATLLEESFKLHTTLNPAQKQALAHQLNLKTRQVEVWFQNRRARTK 127
                     788899***********************************************98 PP
2HD-ZIP_I/II117.95.7e-3873161189
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                     +kk+rlskeq++lLEesF+ +++L+p +K++la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eLr+
  XP_022931479.1  73 RKKLRLSKEQATLLEESFKLHTTLNPAQKQALAHQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRS 161
                     69*************************************************************************************93 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MGDQDDLCNI RLGLSLGSGF GEYVPKKMQK INSNHNNPKS CTDLSFTLVP KQELAINSST  60
TTNSLGSERE RERKKLRLSK EQATLLEESF KLHTTLNPAQ KQALAHQLNL KTRQVEVWFQ  120
NRRARTKLKQ TEVDCEFLKK CCERLNEENR RLKKELHELR SIKLGASQLY IQLPKAATLT  180
ICPSCDKITR TPAANAAAEP NSPPL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17177RERKKLR
2122130RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.17e-50HD-ZIP family protein