PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931515.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YC
Protein Properties Length: 130aa    MW: 14354.8 Da    PI: 7.6098
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931515.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC104.85.7e-3317981898
           NF-YC 18 nhelPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                     h+lPlarikki+k + edvkmisaeaP+++skacelf+ elt rsw+ a ++k+r l+k d+a+a+  tdifdfl+  + +
  XP_022931515.1 17 PHSLPLARIKKIMKkSGEDVKMISAEAPIVFSKACELFVEELTKRSWMIAMQSKKRMLHKEDVASAILATDIFDFLIGLIFH 98
                    599**********73579**********************************************************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MRQAGAYSGV TYWKTGPHSL PLARIKKIMK KSGEDVKMIS AEAPIVFSKA CELFVEELTK  60
RSWMIAMQSK KRMLHKEDVA SAILATDIFD FLIGLIFHET TTAASASAAA ELPESETMSI  120
PVEMSPFLQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.14e-32NF-YC family protein