PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931618.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 148aa    MW: 16862.8 Da    PI: 7.9038
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931618.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH33.66.6e-115578326
                    S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                    t+lC++f+ tG+C+yGd+C++ H+
  XP_022931618.1 55 TRLCNRFLTTGFCQYGDSCNYFHS 78
                    9********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MPLGKYYCDY CEKQFQDTPF ARKRHLQSLS HHKAKALWFD SFRDSNQPLS HAFPTRLCNR  60
FLTTGFCQYG DSCNYFHSNN NPQYSSSHPI AGFPENNQAP NIPVNQFMEG SSLTGSLDRL  120
RTSWGNLPPS LMPPPEGGYP PLPFVDWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.19e-33C3H family protein