PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931711.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 370aa MW: 41398.9 Da PI: 6.5691

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931711.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ede+l+++++ +G g+W+++++ g+ R++k+c++rw +yl XP_022931711.1 14 KGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	45	2.5e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++ E++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_022931711.1 67 RGPFSQHEEDLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGRHSCCYKQ KLRKGLWSPD EDEKLLNYIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGPF SQHEEDLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQKG 120 IDPNTHKPVS VSGDADNDSE KQLPPTSTSH RSNDNSSDEA IETPLPIITS SNSSSQIYSP 180 TQEFFRFQTT TAGSHRASEL VEFLSFHNLN YVSEIPNPNP NSLCFNQTSH LLPPPSIPLK 240 PTWEGTDFTA AAATASGGSS FFDGGNFPWG LPECGKTEKL NPTAIREDKK WSEIMENPFM 300 MGNTTGEQNQ ESQSQNESMY VENLSTAAET EFITESGWQS QTQRQQAQAS SDAVYNKHLH 360 TLTVSFGHTL

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGRHSCCYKQ KLRKGLWSPD EDEKLLNYIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGPF SQHEEDLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQKG  120
IDPNTHKPVS VSGDADNDSE KQLPPTSTSH RSNDNSSDEA IETPLPIITS SNSSSQIYSP  180
TQEFFRFQTT TAGSHRASEL VEFLSFHNLN YVSEIPNPNP NSLCFNQTSH LLPPPSIPLK  240
PTWEGTDFTA AAATASGGSS FFDGGNFPWG LPECGKTEKL NPTAIREDKK WSEIMENPFM  300
MGNTTGEQNQ ESQSQNESMY VENLSTAAET EFITESGWQS QTQRQQAQAS SDAVYNKHLH  360
TLTVSFGHTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	9e-90	MYB family protein