PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931921.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 230aa    MW: 26272.3 Da    PI: 7.0408
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931921.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000136789123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_022931921.1 67 YSCSFCKREFRSAQALGGHMNVH 89
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MEMEPKPCWM MWENKNQNEN KNENRLTTAS DHLNNKASSF DDSWEEQAFA DDAAGRLGGC  60
VWPPRFYSCS FCKREFRSAQ ALGGHMNVHR RDRAMLKHES FKPQIETHLQ IPPKNNPFTS  120
LIDLPQHPSS QFVCDENLAF NPNPKSSQNS VDESDHKWRQ SLDLSIKTTD LFKDDAVCCK  180
RKRSDHHSTS TVAFVLRSEV IGLSHNSIED LDLELRLGDG GGSRTKPKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.12e-25C2H2 family protein