PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931927.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 266aa MW: 29763.3 Da PI: 10.0608

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931927.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.9	3.5e-31	70	123	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rF++av++LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ XP_022931927.1 70 PRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRS 123 8****************************************************7 PP
2	Myb_DNA-binding	50.1	6.4e-16	71	122	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ ++++av+ lGg t+k++ + m+ kg++ ++ks++q+y+ XP_022931927.1 71 RLRWTPDLHFRFLHAVQSLGGQqnaTPKLVLQLMNiKGLSIAHVKSHLQMYR 122 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MEGGSDGGAA AAAAAAAAAA AECSNKSRSD SNKSQSELGN EGSSSNSTIE ENDERQKKPT 60 VRPYVRSKLP RLRWTPDLHF RFLHAVQSLG GQQNATPKLV LQLMNIKGLS IAHVKSHLQM 120 YRSKKSNEMT TVADQRVLMS QTSDRNIFTV SQIPMFQRHN QTYPSNIFRF GSHSWSDYEN 180 KTTQTLYMGK ASALSEARSR EFSTSMVGER NTRTRKGDEE IDLSLSLKIA AREEMKIEKR 240 RRIEQEGLED RTDLSLSLCS FHSKSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	239	243	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-48	G2-like family protein