PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932028.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 221aa MW: 24742 Da PI: 9.1265

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932028.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++++k++G g W++ ++ g+ R++k+c++rw +yl XP_022932028.1 14 KGAWTKEEDQRLINYIKLHGEGGWRSLPNAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	58.6	1.4e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++TteE el+v+++ +lG++ W++Ia++++ gRt++++k++w+++ XP_022932028.1 67 RGNFTTEENELIVNLHSLLGNK-WSLIAAKLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MGRSPCCEKQ HTNKGAWTKE EDQRLINYIK LHGEGGWRSL PNAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TTEENELIVN LHSLLGNKWS LIAAKLPGRT DNEIKNYWNT HIKRKLYSQG 120 IDPRTHRPLI NKGSTCLTRE VEDSNSNSSG SCLTTEVEEN PELNLNLELS IGLHPHKPTT 180 KSPGGGGGGS CFSPILSTTD RVRNGNFLLQ PHLFTCYTSS T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	3e-81	MYB family protein