PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932118.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 360aa MW: 40544.4 Da PI: 4.5426

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932118.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	125	6.3e-39	16	142	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppG+rF Ptdee+v+++Lk+k+ + k++ + ++++d yk+eP++Lp +k+k++++ wyfFs+ k ++g ++ r+t++g W+ tgk+ v+s XP_022932118.1 16 PPGVRFYPTDEEIVMQFLKPKICDPKIQS-DYVTDIDFYKSEPEELPglSKLKNGDRLWYFFSPIVLKFRNGAKSVRTTRHGLWRVTGKKALVKS 109 8************************99.89***********65599999******************************999888 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++vg+++t+vfyk ra+ +e+t+Wvmhey+l XP_022932118.1 110 -NGRAVGMRRTFVFYKRRASIPERTNWVMHEYTL 142 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MQVFRQSSSH DVNRWPPGVR FYPTDEEIVM QFLKPKICDP KIQSDYVTDI DFYKSEPEEL 60 PGLSKLKNGD RLWYFFSPIV LKFRNGAKSV RTTRHGLWRV TGKKALVKSN GRAVGMRRTF 120 VFYKRRASIP ERTNWVMHEY TLDEKELKRC PNVQVCYAVC KVREKSGPGP KIGEQYGAPV 180 NDDSVDQVVL VEESEMDSVV LDSQYHSLPR SIETFDSEQQ PSKAPESLNL TESDMSQLPP 240 SQTPNAEFVF NVSELASCSG DGDFLEMADF CGPAACLNTE NPSGSGNLSY EDLNASMDEL 300 DQWHDVETFL KELGMSLDDL GPSEDDGTVP MAEQNENVNH AANPMDVPLQ SIMKSSSQEK

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MQVFRQSSSH DVNRWPPGVR FYPTDEEIVM QFLKPKICDP KIQSDYVTDI DFYKSEPEEL  60
PGLSKLKNGD RLWYFFSPIV LKFRNGAKSV RTTRHGLWRV TGKKALVKSN GRAVGMRRTF  120
VFYKRRASIP ERTNWVMHEY TLDEKELKRC PNVQVCYAVC KVREKSGPGP KIGEQYGAPV  180
NDDSVDQVVL VEESEMDSVV LDSQYHSLPR SIETFDSEQQ PSKAPESLNL TESDMSQLPP  240
SQTPNAEFVF NVSELASCSG DGDFLEMADF CGPAACLNTE NPSGSGNLSY EDLNASMDEL  300
DQWHDVETFL KELGMSLDDL GPSEDDGTVP MAEQNENVNH AANPMDVPLQ SIMKSSSQEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	2e-60	NAC family protein