PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022932125.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 378aa    MW: 41576.8 Da    PI: 6.4296
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022932125.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.1e-062783161154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_022932125.1 278 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 316
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MAEEFQSSGN WWEASRSRYE AGISPSSSSA AAAADPNLHI TGLALDWNQP LFRGGGEKAA  60
EGSFRSMLQP DNMNLNMLQE TEQQQQIEWM RSEKGINRGF SLDHHHQQFT SPSHYSSTDS  120
AVTTFPIDTT TAATTLYGNS TTLLQGLLGG EQQQVSAAGM NFPYNSHYGI NSNDFMAAGA  180
SWSPSTKLPQ FLRNSTPHNQ LQFSNNTAFW NASDMKDVRP SYVPTSYNTI PEKSKNRSEI  240
GDSVSVGKKS GNDGNQQQSG GGKRGRNESP STLPAFKVRK EKMGDRITAL QQLVSPFGKT  300
DTASVLSEAI EYIKFLHEQV GVLSTPYLKS RSDKWKEGEG EEDLRSRGLC LVPVSSTFPV  360
THDTTVDFWT PTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.14e-57bHLH family protein