PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022932126.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 377aa    MW: 41386.6 Da    PI: 6.2464
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022932126.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.1e-062773151154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_022932126.1 277 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 315
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MAEEFQSSGN WWEASRSRYE AGISPSSSSA AAAADPNLHI TGLALDWNQP LLGGGEKAAE  60
GSFRSMLQPD NMNLNMLQET EQQQQIEWMR SEKGINRGFS LDHHHQQFTS PSHYSSTDSA  120
VTTFPIDTTT AATTLYGNST TLLQGLLGGE QQQVSAAGMN FPYNSHYGIN SNDFMAAGAS  180
WSPSTKLPQF LRNSTPHNQL QFSNNTAFWN ASDMKDVRPS YVPTSYNTIP EKSKNRSEIG  240
DSVSVGKKSG NDGNQQQSGG GKRGRNESPS TLPAFKVRKE KMGDRITALQ QLVSPFGKTD  300
TASVLSEAIE YIKFLHEQVG VLSTPYLKSR SDKWKEGEGE EDLRSRGLCL VPVSSTFPVT  360
HDTTVDFWTP TFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.13e-57bHLH family protein