PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932312.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 503aa MW: 53978.1 Da PI: 6.2936

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932312.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.3	4.4e-30	201	259	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+rs +d +++++tYeg+Hnh+ XP_022932312.1 201 NDGCQWRKYGQKIAKGNPCPRAYYRCTGApSCPVRKQVQRSVDDISILITTYEGTHNHP 259 8************************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MEAQPLPTTA DAVQSAGEDE EHAPKHKVPL MAELEKPSME PLSLASASST WKEEDHEHEQ 60 RLKMAKGEMR EVKEENQRLK RCLDQMMRDY ESLKRQFHDM STINNEAAEE VEDMVSLTLG 120 RSSSDQNKNT CPETKPDLQN IQSPADSEQG KEEDAGQTWP PGKVLKGLAA PAAGEDEVSQ 180 QNPPKKTRVC VRARCDTPTL NDGCQWRKYG QKIAKGNPCP RAYYRCTGAP SCPVRKQVQR 240 SVDDISILIT TYEGTHNHPL PVSAMAMAST TSAAASMLLS GASTSTSRPG LNPSPIGTAS 300 ANLHGMNMYT NSKQFYLSNS SMLSSSLNHP TITLDLTSNP PSASSSSSSS SSSSPFHKIP 360 STYPPKYPFT SLDFGSWNTN INKNVLGMSS DLAKQFPPHT NIYQACLQQF AKPSTPPPPP 420 LPDTIAAATK AITSDPSFQS ALAAALSSII GGGNGGEAVQ AMSSYVQAAQ GQGSMGFQAA 480 PSLTYSTSKS PSSPGDSRDD DTK

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MEAQPLPTTA DAVQSAGEDE EHAPKHKVPL MAELEKPSME PLSLASASST WKEEDHEHEQ  60
RLKMAKGEMR EVKEENQRLK RCLDQMMRDY ESLKRQFHDM STINNEAAEE VEDMVSLTLG  120
RSSSDQNKNT CPETKPDLQN IQSPADSEQG KEEDAGQTWP PGKVLKGLAA PAAGEDEVSQ  180
QNPPKKTRVC VRARCDTPTL NDGCQWRKYG QKIAKGNPCP RAYYRCTGAP SCPVRKQVQR  240
SVDDISILIT TYEGTHNHPL PVSAMAMAST TSAAASMLLS GASTSTSRPG LNPSPIGTAS  300
ANLHGMNMYT NSKQFYLSNS SMLSSSLNHP TITLDLTSNP PSASSSSSSS SSSSPFHKIP  360
STYPPKYPFT SLDFGSWNTN INKNVLGMSS DLAKQFPPHT NIYQACLQQF AKPSTPPPPP  420
LPDTIAAATK AITSDPSFQS ALAAALSSII GGGNGGEAVQ AMSSYVQAAQ GQGSMGFQAA  480
PSLTYSTSKS PSSPGDSRDD DTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	5e-62	WRKY family protein