PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932313.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 440aa MW: 46991.3 Da PI: 7.7035

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932313.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.5	3.6e-30	138	196	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+rs +d +++++tYeg+Hnh+ XP_022932313.1 138 NDGCQWRKYGQKIAKGNPCPRAYYRCTGApSCPVRKQVQRSVDDISILITTYEGTHNHP 196 8************************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MAKGEMREVK EENQRLKRCL DQMMRDYESL KRQFHDMSTI NNEAAEEVED MVSLTLGRSS 60 SDQNKNTCPE TKPDLQNIQS PADSEQGKEE DAGQTWPPGK VLKGLAAPAA GEDEVSQQNP 120 PKKTRVCVRA RCDTPTLNDG CQWRKYGQKI AKGNPCPRAY YRCTGAPSCP VRKQVQRSVD 180 DISILITTYE GTHNHPLPVS AMAMASTTSA AASMLLSGAS TSTSRPGLNP SPIGTASANL 240 HGMNMYTNSK QFYLSNSSML SSSLNHPTIT LDLTSNPPSA SSSSSSSSSS SPFHKIPSTY 300 PPKYPFTSLD FGSWNTNINK NVLGMSSDLA KQFPPHTNIY QACLQQFAKP STPPPPPLPD 360 TIAAATKAIT SDPSFQSALA AALSSIIGGG NGGEAVQAMS SYVQAAQGQG SMGFQAAPSL 420 TYSTSKSPSS PGDSRDDDTK

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MAKGEMREVK EENQRLKRCL DQMMRDYESL KRQFHDMSTI NNEAAEEVED MVSLTLGRSS  60
SDQNKNTCPE TKPDLQNIQS PADSEQGKEE DAGQTWPPGK VLKGLAAPAA GEDEVSQQNP  120
PKKTRVCVRA RCDTPTLNDG CQWRKYGQKI AKGNPCPRAY YRCTGAPSCP VRKQVQRSVD  180
DISILITTYE GTHNHPLPVS AMAMASTTSA AASMLLSGAS TSTSRPGLNP SPIGTASANL  240
HGMNMYTNSK QFYLSNSSML SSSLNHPTIT LDLTSNPPSA SSSSSSSSSS SPFHKIPSTY  300
PPKYPFTSLD FGSWNTNINK NVLGMSSDLA KQFPPHTNIY QACLQQFAKP STPPPPPLPD  360
TIAAATKAIT SDPSFQSALA AALSSIIGGG NGGEAVQAMS SYVQAAQGQG SMGFQAAPSL  420
TYSTSKSPSS PGDSRDDDTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-61	WRKY family protein