PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022932338.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 180aa    MW: 19100.2 Da    PI: 5.035
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022932338.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB174.88.8e-5519114297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     re+d +lPianv+rimkk+lP+nakiskdake+vqecvsefisfvt+easdkc++ekrktingddllwa+atlGfedyv+plk+yl+++re+ege
  XP_022932338.1  19 REHDGLLPIANVGRIMKKALPGNAKISKDAKEIVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGE 113
                     799*******************************************************************************************9 PP

           NF-YB  97 k 97 
                     +
  XP_022932338.1 114 R 114
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MADSDNDSGG GYQKSPSPRE HDGLLPIANV GRIMKKALPG NAKISKDAKE IVQECVSEFI  60
SFVTGEASDK CHNEKRKTIN GDDLLWAMAT LGFEDYVDPL KLYLQRFREI EGERTALASR  120
DSSSSASAVA AAAAGAANST FFDGGGEFGG GMGMTMPPNV YGSNGPRWDG PGFTTTGRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.16e-64NF-YB family protein