PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932357.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 551aa MW: 60522.2 Da PI: 7.0044

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932357.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.3	4.8e-31	206	263	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ ++++++i+Y+g+H+h+k XP_022932357.1 206 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-NGQITDIVYKGTHDHPK 263 8**************************************.*************85 PP
2	WRKY	105.3	3.2e-33	377	435	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_022932357.1 377 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 435 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MDPTEPASTA AAGAKYKLMS PAKLPIFRSP CITIPPGLSP SSFLDSPVLL TNFKVEPSPT 60 TGSFTKLPMT HDSSSSAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM VPADMNHRKD 120 EQSCELQVQG QPQPFTAPPM TKSEINVISN DSSRSTQMDP VASGAAVPDI DGDDFNHSLN 180 TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKHVK GSEFPRSYYK CTHPNCEVKK 240 LFERSHNGQI TDIVYKGTHD HPKLQPSRRY SAGASVKDGP DKPSPLTGQD DRSCSIYTQT 300 VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDDDI ILKRRKMELG GFEACPMVRP 360 IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTNVGCPV RKHVERASHD 420 PKAVITTYEG KHNHDVPTAK SSSHDAAGPL RTAPLRYRLE DRDTVSLDLG VGIGENRSNE 480 YRQQPLAPNG NFNFEVVQEN SAPTYFNVHN RGMNQHGPRE SLSESQSVDV VPLNHSSHPY 540 PPSVGRILTG P

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MDPTEPASTA AAGAKYKLMS PAKLPIFRSP CITIPPGLSP SSFLDSPVLL TNFKVEPSPT  60
TGSFTKLPMT HDSSSSAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM VPADMNHRKD  120
EQSCELQVQG QPQPFTAPPM TKSEINVISN DSSRSTQMDP VASGAAVPDI DGDDFNHSLN  180
TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKHVK GSEFPRSYYK CTHPNCEVKK  240
LFERSHNGQI TDIVYKGTHD HPKLQPSRRY SAGASVKDGP DKPSPLTGQD DRSCSIYTQT  300
VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDDDI ILKRRKMELG GFEACPMVRP  360
IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTNVGCPV RKHVERASHD  420
PKAVITTYEG KHNHDVPTAK SSSHDAAGPL RTAPLRYRLE DRDTVSLDLG VGIGENRSNE  480
YRQQPLAPNG NFNFEVVQEN SAPTYFNVHN RGMNQHGPRE SLSESQSVDV VPLNHSSHPY  540
PPSVGRILTG P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-176	WRKY family protein