PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932358.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 501aa MW: 55308.1 Da PI: 6.7903

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932358.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.5	4.2e-31	156	213	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ ++++++i+Y+g+H+h+k XP_022932358.1 156 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-NGQITDIVYKGTHDHPK 213 8**************************************.*************85 PP
2	WRKY	105.5	2.8e-33	327	385	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_022932358.1 327 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 385 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MLLSVEPSPT TGSFTKLPMT HDSSSSAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM 60 VPADMNHRKD EQSCELQVQG QPQPFTAPPM TKSEINVISN DSSRSTQMDP VASGAAVPDI 120 DGDDFNHSLN TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKHVK GSEFPRSYYK 180 CTHPNCEVKK LFERSHNGQI TDIVYKGTHD HPKLQPSRRY SAGASVKDGP DKPSPLTGQD 240 DRSCSIYTQT VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDDDI ILKRRKMELG 300 GFEACPMVRP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTNVGCPV 360 RKHVERASHD PKAVITTYEG KHNHDVPTAK SSSHDAAGPL RTAPLRYRLE DRDTVSLDLG 420 VGIGENRSNE YRQQPLAPNG NFNFEVVQEN SAPTYFNVHN RGMNQHGPRE SLSESQSVDV 480 VPLNHSSHPY PPSVGRILTG P

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MLLSVEPSPT TGSFTKLPMT HDSSSSAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM  60
VPADMNHRKD EQSCELQVQG QPQPFTAPPM TKSEINVISN DSSRSTQMDP VASGAAVPDI  120
DGDDFNHSLN TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKHVK GSEFPRSYYK  180
CTHPNCEVKK LFERSHNGQI TDIVYKGTHD HPKLQPSRRY SAGASVKDGP DKPSPLTGQD  240
DRSCSIYTQT VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDDDI ILKRRKMELG  300
GFEACPMVRP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTNVGCPV  360
RKHVERASHD PKAVITTYEG KHNHDVPTAK SSSHDAAGPL RTAPLRYRLE DRDTVSLDLG  420
VGIGENRSNE YRQQPLAPNG NFNFEVVQEN SAPTYFNVHN RGMNQHGPRE SLSESQSVDV  480
VPLNHSSHPY PPSVGRILTG P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-154	WRKY family protein