PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932359.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 462aa MW: 51453.1 Da PI: 7.4616

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932359.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.7	3.7e-31	117	174	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ ++++++i+Y+g+H+h+k XP_022932359.1 117 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-NGQITDIVYKGTHDHPK 174 8**************************************.*************85 PP
2	WRKY	105.6	2.5e-33	288	346	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_022932359.1 288 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 346 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MKVDITFVMS DIKLKSYHVS FLMSYMNHRK DEQSCELQVQ GQPQPFTAPP MTKSEINVIS 60 NDSSRSTQMD PVASGAAVPD IDGDDFNHSL NTNTRAQAAQ SDPKGSGSPV VSDRISDDGY 120 NWRKYGQKHV KGSEFPRSYY KCTHPNCEVK KLFERSHNGQ ITDIVYKGTH DHPKLQPSRR 180 YSAGASVKDG PDKPSPLTGQ DDRSCSIYTQ TVHSIEPNGT PERLAANDSN TEGAGTTLPC 240 KNPDELDDDD IILKRRKMEL GGFEACPMVR PIREPRVVVQ TLSEVDILDD GYRWRKYGQK 300 VVRGNPNPRS YYKCTNVGCP VRKHVERASH DPKAVITTYE GKHNHDVPTA KSSSHDAAGP 360 LRTAPLRYRL EDRDTVSLDL GVGIGENRSN EYRQQPLAPN GNFNFEVVQE NSAPTYFNVH 420 NRGMNQHGPR ESLSESQSVD VVPLNHSSHP YPPSVGRILT GP

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MKVDITFVMS DIKLKSYHVS FLMSYMNHRK DEQSCELQVQ GQPQPFTAPP MTKSEINVIS  60
NDSSRSTQMD PVASGAAVPD IDGDDFNHSL NTNTRAQAAQ SDPKGSGSPV VSDRISDDGY  120
NWRKYGQKHV KGSEFPRSYY KCTHPNCEVK KLFERSHNGQ ITDIVYKGTH DHPKLQPSRR  180
YSAGASVKDG PDKPSPLTGQ DDRSCSIYTQ TVHSIEPNGT PERLAANDSN TEGAGTTLPC  240
KNPDELDDDD IILKRRKMEL GGFEACPMVR PIREPRVVVQ TLSEVDILDD GYRWRKYGQK  300
VVRGNPNPRS YYKCTNVGCP VRKHVERASH DPKAVITTYE GKHNHDVPTA KSSSHDAAGP  360
LRTAPLRYRL EDRDTVSLDL GVGIGENRSN EYRQQPLAPN GNFNFEVVQE NSAPTYFNVH  420
NRGMNQHGPR ESLSESQSVD VVPLNHSSHP YPPSVGRILT GP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-144	WRKY family protein