PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932374.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YB

Protein Properties

Length: 228aa MW: 24602.3 Da PI: 6.6207

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932374.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	168.5	8.3e-53	72	168	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++++d+lwa+++lGf+dy+epl+++l++yre e+ XP_022932374.1 72 VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTMFLNRYRESES 166 69*******************************************************************************************99 PP NF-YB 96 ek 97 ++ XP_022932374.1 167 DR 168 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MECGGSSAAA GGGGGGGGGG DGFHSYRRQH SKPTSGLNHH LTNGATATGN SPATCHVPVT 60 GANNEQSQQC MVREQDQYMP IANVIRIMRR ILPSHAKISD DAKETIQECV SEYISFITGE 120 ANERCQREQR KTVTAEDVLW AMGKLGFDDY IEPLTMFLNR YRESESDRVR TEPILRRNVD 180 YVPQVGMMPP YGQAFPLGHT STGMFDAMGG YYGGGRSGGT SSGNGNQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	1e-65	NF-YB family protein