PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022932581.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 350aa    MW: 37030.9 Da    PI: 8.2458
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022932581.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.9e-11284329655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L+el+P+     +k  s +++L +Av++Ik Lq
  XP_022932581.1 284 SIAERERRTRISGKLKKLQELVPNM----DKQTSYSDMLDLAVQHIKGLQ 329
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MYQSTSSSSS SHNSMPSSHA GGGGLTRYGS APGSLLNSAV DSVIGKRHPD SDAFLRTPPS  60
FGGHFFSSAE SSVVESSRKV VQSSSTSDDL KSSAAAAAAA LQRSYGIHDL ALEDFSTARD  120
FNSNGGQSSS SSPLVRQRSS PAGFLGHLSV AEGTGGFSLT RGGGGGIGRL KSQLSFSGGQ  180
DSVSQMSSMS ESVVEGSSSH SFAPTAFAMD SWDTSNSIAF AAPHPKRSKL LHSDGDFFTG  240
LDSQFSLPQT SFEMATVERL LQIPEDSVPC KIRAKRGCAT HPRSIAERER RTRISGKLKK  300
LQELVPNMDK QTSYSDMLDL AVQHIKGLQN QIQKLNKEVE NCTCGSKECS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.21e-61bHLH family protein