PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932597.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 246aa MW: 28118.4 Da PI: 5.1586

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932597.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	122.6	3.5e-38	17	140	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 ppGfrFhPtdeel+ +yL +++ + +l++ vi+++d +++Pw Lp + ++e yfFs++ k ++g r+t+sgyWk g+d++v+s+ XP_022932597.1 17 PPGFRFHPTDEELLLQYLMRRAFSLPLPA-PVISDIDGGRFDPWVLPGN---WQRERYFFSTKFPKFPNGGSFIRITASGYWKPVGNDRAVVSSk 107 9*************************9.89***********43...46899******************************9986 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg kk+Lvfy g+ p g ktdW+mheyrl XP_022932597.1 108 QDQLVGWKKSLVFYVGKFPYGMKTDWIMHEYRL 140 7778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MAANRIAYLK NGVLRFPPGF RFHPTDEELL LQYLMRRAFS LPLPAPVISD IDGGRFDPWV 60 LPGNWQRERY FFSTKFPKFP NGGSFIRITA SGYWKPVGND RAVVSSKQDQ LVGWKKSLVF 120 YVGKFPYGMK TDWIMHEYRL VDFPPSAMNA QLPPFNPNLV LCRIFFKKRD ITRENDENNN 180 VGSRPVLRNF LRATNNTELN PSPTSSSSSG SSGVTDITLG NSDDDDDDDD YEEEDDEETS 240 SFYKNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-63	NAC family protein