PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022932667.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ARR-B
Protein Properties Length: 697aa    MW: 76149.3 Da    PI: 5.6549
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022932667.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.76.1e-29211264155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv+av+qL G ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  XP_022932667.1 211 KPRVVWSVELHKKFVSAVNQL-GLEKAVPKKILDLMNVEGLTRENVASHLQKYRL 264
                     79*******************.********************************8 PP
2Myb_DNA-binding41.62.9e-13213263148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e+++++v av+qlG +   +k+I   m+ +g+t++++ s++qky+
   XP_022932667.1 213 RVVWSVELHKKFVSAVNQLGLEkaVPKKILDLMNvEGLTRENVASHLQKYR 263
                      678***********************************************7 PP
3Response_reg84.53.1e-28261341109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+p+ +++l+++l++ +y +v++++++ eal++l+e++  +Dl++ D++mp+mdG++ll+     e++lp+i+++ah++ e++ + ++ G
  XP_022932667.1  26 VLAVDDDPICLKVLETLLRRCQY-HVTTTKQSIEALKMLRENRnnFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSAHSDTELVMKGISHG 118
                     799********************.***************999889*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_022932667.1 119 ACDYLLKPVRIEELKN 134
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    
MTVEAHSVTS VGDDGATDRF PVGMRVLAVD DDPICLKVLE TLLRRCQYHV TTTKQSIEAL  60
KMLRENRNNF DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MLSAHSDTEL VMKGISHGAC  120
DYLLKPVRIE ELKNIWQHVI RRKKLEPKAK NKFPSEDKAR NGGSEGEQGF SSTSNADNAK  180
FNRKRKDQDD DDDEDGKDNG LDNDDPSNQK KPRVVWSVEL HKKFVSAVNQ LGLEKAVPKK  240
ILDLMNVEGL TRENVASHLQ KYRLYLKRIS NVASQQANMV ATFGSKDGAF MGMGSLDGYG  300
DLHGFAGMGR LQNSSLSSYS PVGMLGRLNS PAGMSLRGIT SSGLIQQNSK NLNSAISNLG  360
KLQPTTMLPP NQPTNLLQGI PTSLELSQLQ HSKSTIPIGD FNIINETSGF GVPNSFPDSR  420
VNIGNSTNLV STAPLMLQGT MPTYGNQTSL RVDPLNGETF DVDIGGSNFL DPDPSNGTWQ  480
GAAQLSRFSA TSLNQNQAYP NDQFNAINSS ISSTPSTFGN VSVDFSSRNA VAAPLQDSRD  540
MQCQAGVVGS VIQTINTMPK QSWEELKHDY SRNVQHNLGA INSLVSGNET LNPLSQSFNQ  600
NNLIYDRKVS SSLMVPSNAA PLSFAQHNMV EKLGPNTKTN VDGNYLLNQT KSHDGSTQGS  660
SESLDYIMNA MIKREQNEIP EVNGEFGFDN FSLGSCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-131ARR-B family protein