PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932705.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 383aa MW: 41821.8 Da PI: 8.7111

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932705.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.4	7.9e-34	51	105	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m+++gLtl+h+kSHLQkYRl XP_022932705.1 51 KPRLKWTPDLHDRFVEAVNQLGGADKATPKTVMKIMGIPGLTLYHLKSHLQKYRL 105 79****************************************************8 PP
2	Myb_DNA-binding	63.1	5.3e-20	53	104	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_022932705.1 53 RLKWTPDLHDRFVEAVNQLGGAdkaTPKTVMKIMGiPGLTLYHLKSHLQKYR 104 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MYHHHQQQQQ HHQHNRGKSI HSSDTHLFLQ PGNAAAGAGD SSGLVLSTDA KPRLKWTPDL 60 HDRFVEAVNQ LGGADKATPK TVMKIMGIPG LTLYHLKSHL QKYRLSKNVH GQANGGGNGS 120 NKTDMGWRVG TVAAVYGDQR LAAEANGTAR TNNIVVAPQP SSHPNKSLQI SETIQMQIEV 180 QKRLHEQLEV QRHLQLRIEA QGKYLQTVLE KAQETLGRQD LGSVGLEAAK VQLSELVSKV 240 STQCLTAAFP ELQQTQRLCP QQTQPPDCSM DSCLTSGEAS KDQRRQQQLL LHNSQHALRP 300 KAIATDHHGL SMSIGLLQGD KGGEGDNGYS PSFGSKKKEG EAAFRYRMAA SFLDLNAGED 360 QQLGNNDHAA SATCKMFDLN GFS

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MYHHHQQQQQ HHQHNRGKSI HSSDTHLFLQ PGNAAAGAGD SSGLVLSTDA KPRLKWTPDL  60
HDRFVEAVNQ LGGADKATPK TVMKIMGIPG LTLYHLKSHL QKYRLSKNVH GQANGGGNGS  120
NKTDMGWRVG TVAAVYGDQR LAAEANGTAR TNNIVVAPQP SSHPNKSLQI SETIQMQIEV  180
QKRLHEQLEV QRHLQLRIEA QGKYLQTVLE KAQETLGRQD LGSVGLEAAK VQLSELVSKV  240
STQCLTAAFP ELQQTQRLCP QQTQPPDCSM DSCLTSGEAS KDQRRQQQLL LHNSQHALRP  300
KAIATDHHGL SMSIGLLQGD KGGEGDNGYS PSFGSKKKEG EAAFRYRMAA SFLDLNAGED  360
QQLGNNDHAA SATCKMFDLN GFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	7e-96	G2-like family protein