PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022932754.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 291aa    MW: 32028.1 Da    PI: 8.8807
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022932754.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.53.7e-18213247135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+C++  Tp+WR gp g+ktLCnaCG++y+k g+
  XP_022932754.1 213 CSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGR 247
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDYQPKMVSV NSENEQDDCS KLKSELSSTL DDDLCSLQMT TMEVDVNLEW LSAFVEECLS  60
AKGSSLPLPL PPPQLSTHLN NPPPPPNSLS RPTPSSSDSP FSHFSAVPSK ARSKRRQAPA  120
NTSIRPLIGQ HHLDQLNLLP SKQSLQLTSS SADTLLLQQT YWLADSELLL PHKARGGGEE  180
EREKKVDMDQ RDTTVKKSLG LQQKQGAGSG RRCSHCQAQR TPQWRGGPLG PKTLCNACGV  240
RYKKSGRLVP EYRPANSPTF VSFLHSNSHK RVMEMRMINA SSSTSTAFSS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-35GATA family protein