PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933031.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GeBP

Protein Properties

Length: 400aa MW: 44193.3 Da PI: 4.6603

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933031.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	118.1	4.8e-37	111	209	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 klfqrlw++eDei lLqG++d+++++g+ + ++ d+ fy+++k++++++++k+qlveK+rrLKkK+++ k++sgke++f+++hdq +fe+s+ XP_022933031.1 111 KLFQRLWTDEDEIELLQGFLDYTMQRGTtHHHQnDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKEFNFKSPHDQATFEISR 205 579***********************633446********************************************************* PP DUF573 94 kiWg 97 kiW XP_022933031.1 206 KIWS 209 *6 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MDPRNDAVFP DEDLEDDEES LDDDDDDEEE EELNDGPSPS TSSAGAVAVP SVSPVVTIAT 60 PGTAVRPVSI VPPPSIVSIS SAVLIRQRIG TAAAEPLVLP GEKKPLDECR KLFQRLWTDE 120 DEIELLQGFL DYTMQRGTTH HHQNDTALFY DQIKSKLQLD FNKNQLVEKL RRLKKKYRNV 180 IGKISSGKEF NFKSPHDQAT FEISRKIWSN TGRIGVEDNA LDDDEPAPPP YANYMDIKNE 240 EMTLNCSEKK PTPTPKSRKR SRPGSGLRMD GPRSSNENLN KEKNSTYINN NNNSENVSNV 300 AVAGLIEETV RSCLSPLFKE LSSTSMGGGL CGGRGFSGLA LHPIPLSFGG ASINFGGGGD 360 MADERWRKQQ ILELEVYSKR LELVQEQIKT ALEDLRSMGG

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MDPRNDAVFP DEDLEDDEES LDDDDDDEEE EELNDGPSPS TSSAGAVAVP SVSPVVTIAT  60
PGTAVRPVSI VPPPSIVSIS SAVLIRQRIG TAAAEPLVLP GEKKPLDECR KLFQRLWTDE  120
DEIELLQGFL DYTMQRGTTH HHQNDTALFY DQIKSKLQLD FNKNQLVEKL RRLKKKYRNV  180
IGKISSGKEF NFKSPHDQAT FEISRKIWSN TGRIGVEDNA LDDDEPAPPP YANYMDIKNE  240
EMTLNCSEKK PTPTPKSRKR SRPGSGLRMD GPRSSNENLN KEKNSTYINN NNNSENVSNV  300
AVAGLIEETV RSCLSPLFKE LSSTSMGGGL CGGRGFSGLA LHPIPLSFGG ASINFGGGGD  360
MADERWRKQQ ILELEVYSKR LELVQEQIKT ALEDLRSMGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	5e-57	GeBP family protein