PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933042.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 578aa MW: 63531.4 Da PI: 6.6297

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933042.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.7	8.5e-32	222	279	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+++v+i+Y+g+H+h+k XP_022933042.1 222 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQIVDIIYKGTHDHPK 279 8**************************************.*************85 PP
2	WRKY	105.2	3.4e-33	397	455	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_022933042.1 397 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 455 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MDPTDADLAD PSHARLSVSS EPSSASAAGA KYKLLSPAKL PISRSPCITI PPGLSPTSFL 60 ESPVLLTNLK VEPSPTTGSF TKLPMAHDSS SSAIYSMTTM AFSNTHASDE GRSSYFEFKP 120 YAGPNMVPAD LSHRKGEQSS EVQVQGQPQP FTALPMTKSE INVNSNDLSR STQMDTVASR 180 ATVPEVDGDD FNHSLNTNTR VQPPQSDPKA SGIQVVSDRL SDDGYNWRKY GQKHVKGSEF 240 PRSYYKCTHP NCEVKKLFER SHDGQIVDII YKGTHDHPKP QPSRRYSASA SMNVQEDGPD 300 KPSPLTGQDD RSCIIYAPVV RTIEPNGTPE PSHAANDSMA EGVGTTLPPR SHDEVDDDDI 360 FSKRRKMELG GFDVCPMVKP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY 420 YKCTNVGCPV RKHVERASHD PKAVITTYEG KHNHDVPTAK TSSHEVQGSL TIAPSRYRLE 480 ESDTISLDLG VGIGAGGENR SNEYRQAFHS QLAENQNPNG NFNFEIVQEN SPPTYFGVLD 540 RGISQHGSRE SLSESRTMSL NHSSHPYPPS IERILTGP

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MDPTDADLAD PSHARLSVSS EPSSASAAGA KYKLLSPAKL PISRSPCITI PPGLSPTSFL  60
ESPVLLTNLK VEPSPTTGSF TKLPMAHDSS SSAIYSMTTM AFSNTHASDE GRSSYFEFKP  120
YAGPNMVPAD LSHRKGEQSS EVQVQGQPQP FTALPMTKSE INVNSNDLSR STQMDTVASR  180
ATVPEVDGDD FNHSLNTNTR VQPPQSDPKA SGIQVVSDRL SDDGYNWRKY GQKHVKGSEF  240
PRSYYKCTHP NCEVKKLFER SHDGQIVDII YKGTHDHPKP QPSRRYSASA SMNVQEDGPD  300
KPSPLTGQDD RSCIIYAPVV RTIEPNGTPE PSHAANDSMA EGVGTTLPPR SHDEVDDDDI  360
FSKRRKMELG GFDVCPMVKP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY  420
YKCTNVGCPV RKHVERASHD PKAVITTYEG KHNHDVPTAK TSSHEVQGSL TIAPSRYRLE  480
ESDTISLDLG VGIGAGGENR SNEYRQAFHS QLAENQNPNG NFNFEIVQEN SPPTYFGVLD  540
RGISQHGSRE SLSESRTMSL NHSSHPYPPS IERILTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein