PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933125.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 382aa MW: 41849.7 Da PI: 7.9576

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933125.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.9	5.4e-34	40	94	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m++ gLtl+h+kSHLQkYRl XP_022933125.1 40 KPRLKWTPDLHDRFVEAVNQLGGPDKATPKTVMKIMGISGLTLYHLKSHLQKYRL 94 79****************************************************8 PP
2	Myb_DNA-binding	64.8	1.7e-20	42	93	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg+ t+kt+++ mg g+tl+++ks++qky+ XP_022933125.1 42 RLKWTPDLHDRFVEAVNQLGGPdkaTPKTVMKIMGiSGLTLYHLKSHLQKYR 93 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL 60 GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGMGWRVGT 120 VAVSVDQRLG EANGAGRTNN SIAVAPQASS QPNNLQISET IQMQIEVQKR LHEQLEVQRH 180 LQLRIEAQGK YLQTVLEKAQ ETLGRQNLGT VGLEAAKVQL SELVSKVSTQ CLTAAFPELH 240 HHQQQQQQNQ PQRLCPQQTQ PPDCSMDSCL TSCEASKDQQ NSHLALQPYA IATDRGSSAA 300 DQLHGLSMGM GLVQGEKGEG YNGYSPSEGQ RFGSTRKEGV EKEKVEGAFR YRMDLNAGED 360 QLSDNDHAAS NTCKMFDLNG FS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL  60
GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGMGWRVGT  120
VAVSVDQRLG EANGAGRTNN SIAVAPQASS QPNNLQISET IQMQIEVQKR LHEQLEVQRH  180
LQLRIEAQGK YLQTVLEKAQ ETLGRQNLGT VGLEAAKVQL SELVSKVSTQ CLTAAFPELH  240
HHQQQQQQNQ PQRLCPQQTQ PPDCSMDSCL TSCEASKDQQ NSHLALQPYA IATDRGSSAA  300
DQLHGLSMGM GLVQGEKGEG YNGYSPSEGQ RFGSTRKEGV EKEKVEGAFR YRMDLNAGED  360
QLSDNDHAAS NTCKMFDLNG FS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-102	G2-like family protein