PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022933345.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 310aa    MW: 33630.5 Da    PI: 7.7632
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022933345.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding445.2e-14102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + +q G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_022933345.1 102 PWTEEEHKLFLIGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKY 146
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRSITAAVNE SAATEIGGGG PGEIMLFGVR VVVDSMRKSV SLNNLSQYEQ PHEAADVIAN  60
DNMNDPVSVN HKDVVAAGYA SADDAVPNAC GNRERERKRG VPWTEEEHKL FLIGLQQVGK  120
GDWRGISRNF VKTRTPTQVA SHAQKYYLRR SNLNRRRRRS SLFDITTDTV TAVPMVENSV  180
QLQETASQSH SLTPSNQLEI SKNNVIPALQ TLPFSFGPTP FATPTKNPME KGGGPGEVST  240
EKDGPLKLGL TNSIYSSDQT PNLNSNSAME SSALSLRLAL TSEQREASTR HSTFQSMPSF  300
NNGEGIISAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.21e-63MYB_related family protein