PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022933451.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 311aa    MW: 31562.1 Da    PI: 8.9389
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022933451.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702196.87e-61952584154
          DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...aeaaskrkrelkskkqsalsstklssae 95 
                     g  +C+dCGnqakkdC+h+RCR CCksrgfdCathvkstWvpaa+rrerq   aaa++ a+  +   +++  k++r   ++++++ s+t++s++ 
  XP_022933451.1  95 GVGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQVLSAAAAAAATGGTssgSTSGGKKPRLI-ASQTTTNSHTSTSNT- 187
                     5568*********************************************99988877776655533345555555543.444445555555544. PP

          DUF702  96 skkeletss.........lPeevsseavfrcvrvssvdd...geeelaYqtavsigGhvfkGiLydqGlee 154
                     ++++++t s         lPe+v+++avf+cvrv++v+    g +e+aYq++v+igGhvfkG+Lyd+G+e+
  XP_022933451.1 188 PTRSFDTCSdmsykrakkLPEQVRAPAVFKCVRVTAVEGggtGGNEYAYQAVVKIGGHVFKGYLYDHGVEA 258
                     555666666688899999********************8544679***********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MWPSTSSTRP IAGAYGHTAP PPTDMVGLMA SGYGVGLSVL PLLTGLAPSS VGIEETNLMI  60
SRGGDGGGGG GGVQFHGNNF DGFGFLGGGS SLNSGVGTCH DCGNQAKKDC NHRRCRSCCK  120
SRGFDCATHV KSTWVPAARR RERQVLSAAA AAAATGGTSS GSTSGGKKPR LIASQTTTNS  180
HTSTSNTPTR SFDTCSDMSY KRAKKLPEQV RAPAVFKCVR VTAVEGGGTG GNEYAYQAVV  240
KIGGHVFKGY LYDHGVEARE GFPMLSDLHL GGGGDGGSTS SPIIDPSDVY GSSAGRGGGL  300
AGSSGYGNPI N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.11e-51SRS family protein