PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933499.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 254aa MW: 28977.8 Da PI: 6.4029

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933499.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.6	6.9e-55	15	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++ + +i+evd++k+ePwdLp k+k +ekewyfF+ rd+ky++g r+nratk+gyWkatgkd+e+++ XP_022933499.1 15 LPPGFRFHPTDEELITHYLSQKVVSSGFCS-PAIAEVDLNKCEPWDLPGKAKMGEKEWYFFCVRDRKYPSGLRTNRATKAGYWKATGKDREIFK- 107 79***********************877.78***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ lvg kktLvfykgrap+g+k++Wvmheyrl XP_022933499.1 108 GRCLVGFKKTLVFYKGRAPRGQKSNWVMHEYRL 140 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MEKSEEEEDQ TVMELPPGFR FHPTDEELIT HYLSQKVVSS GFCSPAIAEV DLNKCEPWDL 60 PGKAKMGEKE WYFFCVRDRK YPSGLRTNRA TKAGYWKATG KDREIFKGRC LVGFKKTLVF 120 YKGRAPRGQK SNWVMHEYRL HAQSSAFSQE WVICRVLKKR SGKKGEETGM SSTVLPPLME 180 SEASLVTCFS NSMEDGTELL DKLWSGHFEE EEDGGGEVWR LKLGSSKGFE EPFGFGANNH 240 PSPPLDDLHC LWNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.1	8e-89	NAC family protein