PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933550.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 380aa MW: 41454.6 Da PI: 7.7573

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933550.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.4	1.8e-39	36	96	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s XP_022933550.1 36 PDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTEGGTIRNVPVGAGRRKNKNSA 96 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MNPEVLSADE NDKLAASKTE KEQNDAPNSK ERLKKPDKIL PCPRCNSMET KFCYYNNYNV 60 NQPRHFCKAC QRYWTEGGTI RNVPVGAGRR KNKNSASHYR HITISEALRA AQIDVPIEVN 120 HLASKGNGRV LNFSVSAPVC ESMVNVLNPA ERKVLNGTRN EFEGAKGPCE GGETGDDCSS 180 ASSVTMSSSM ENGARRFPQE PQMQNINGCP SQIPCLPGVP WPCSWTAPIP PPAFCPPGVP 240 LSLYPATYWS CNAPGSWNIP WFTPQPCPPI PGPNSPTLGK HSRDGDELQA DNSGMENPPK 300 QKNGSVLVPK TLRIDDPNEA AMSSIWETLG IKNDSIKAVD LSNVFQSKGD QKSNVSEVLS 360 PVLQANPAAL SRSLTFHERS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MNPEVLSADE NDKLAASKTE KEQNDAPNSK ERLKKPDKIL PCPRCNSMET KFCYYNNYNV  60
NQPRHFCKAC QRYWTEGGTI RNVPVGAGRR KNKNSASHYR HITISEALRA AQIDVPIEVN  120
HLASKGNGRV LNFSVSAPVC ESMVNVLNPA ERKVLNGTRN EFEGAKGPCE GGETGDDCSS  180
ASSVTMSSSM ENGARRFPQE PQMQNINGCP SQIPCLPGVP WPCSWTAPIP PPAFCPPGVP  240
LSLYPATYWS CNAPGSWNIP WFTPQPCPPI PGPNSPTLGK HSRDGDELQA DNSGMENPPK  300
QKNGSVLVPK TLRIDDPNEA AMSSIWETLG IKNDSIKAVD LSNVFQSKGD QKSNVSEVLS  360
PVLQANPAAL SRSLTFHERS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	9e-98	Dof family protein