PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933661.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 521aa MW: 60242.6 Da PI: 7.0307

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933661.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.4	1e-14	98	157	1	65
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 +W+++e laL+++r+++++ + ++ We+vs+k+ e gf+r+p +Ckek+e+ ++++ i+ XP_022933661.1 98 QWSNDELLALLRIRSNIDNCFPES-----TWEHVSRKLGEVGFTRTPDKCKEKFEDESRYFNHIN 157 7****************99998.....9*****************************9876 PP
2	trihelix	90.4	2e-28	397	498	1	86
trihelix 1 rWtkqevlaLiearr........emeerlrrgk.................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 rW+++evlaL+++r + + lk+plWe++s+ m + g++rs+k+Ckekwen+nk+++k+k+ +kk XP_022933661.1 397 RWPRDEVLALVNVRCslydnnsnN--------NnnnsdqdksggtdqatlLKAPLWERISQGMLQLGYKRSAKRCKEKWENINKYFRKTKDVNKK 483 8***********9554443330........223455666777777888***************************************** PP trihelix 71 rtsessstcpyfdqle 86 r s +s+tcpyf+ql XP_022933661.1 484 R-SIDSRTCPYFHQLS 498 8.78889*****95 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MFEGSVSEQL HQFLAPRTTT TTTTTTTPPN SNSLPFLLHS PNFNFHPFDS YNPSSNHHLV 60 HQSSENDNET TTTTTTTMAN LSVAMDLEDH NHHNHHNQWS NDELLALLRI RSNIDNCFPE 120 STWEHVSRKL GEVGFTRTPD KCKEKFEDES RYFNHINYNK TCMFLTHELN YDQETEDGGA 180 VVVVPEEAKH ERGNDNNDNN DDNDEQQQSS SKSKRKRKTR TTRQREFEVL KGYCEDIVKN 240 MMIQQEEIHS KLLHEMLKRE EEKIAKEECW KKQQMERFHK ELQMMAQEQA IASDRQATMI 300 EILNQISISN PFSSSKSKKD LQNLLHSLNH HHNNNNNLPN SPSSSSLIQT QNPKNPSSST 360 QILPPQDPNS NPPPFSIQKL PQNPKTREKE VDDLGKRWPR DEVLALVNVR CSLYDNNSNN 420 NNNNSDQDKS GGTDQATLLK APLWERISQG MLQLGYKRSA KRCKEKWENI NKYFRKTKDV 480 NKKRSIDSRT CPYFHQLSTL YNQGGNRSME NLPDNVVGKP L

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MFEGSVSEQL HQFLAPRTTT TTTTTTTPPN SNSLPFLLHS PNFNFHPFDS YNPSSNHHLV  60
HQSSENDNET TTTTTTTMAN LSVAMDLEDH NHHNHHNQWS NDELLALLRI RSNIDNCFPE  120
STWEHVSRKL GEVGFTRTPD KCKEKFEDES RYFNHINYNK TCMFLTHELN YDQETEDGGA  180
VVVVPEEAKH ERGNDNNDNN DDNDEQQQSS SKSKRKRKTR TTRQREFEVL KGYCEDIVKN  240
MMIQQEEIHS KLLHEMLKRE EEKIAKEECW KKQQMERFHK ELQMMAQEQA IASDRQATMI  300
EILNQISISN PFSSSKSKKD LQNLLHSLNH HHNNNNNLPN SPSSSSLIQT QNPKNPSSST  360
QILPPQDPNS NPPPFSIQKL PQNPKTREKE VDDLGKRWPR DEVLALVNVR CSLYDNNSNN  420
NNNNSDQDKS GGTDQATLLK APLWERISQG MLQLGYKRSA KRCKEKWENI NKYFRKTKDV  480
NKKRSIDSRT CPYFHQLSTL YNQGGNRSME NLPDNVVGKP L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	3e-72	Trihelix family protein