PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933738.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 395aa MW: 41779.7 Da PI: 6.3152

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933738.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.2e-12	203	248	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022933738.1 203 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 248 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MQPCSREMET LNSLLNNSQI SLQDLHGDDH HLNPPSEQIP GSQLHHFDPV AAASHDDFLE 60 QMLHTIPSCS WPDLNPSNPK SPWDINPINK PSRDISDTSP AAKAAVMLQQ QLLLSRGISS 120 VADHGLPPMP LSLSNADLDR SHNDIVDRSC FRPPNSGGGI QSHSFGAQGN MMNQAPDGGS 180 GGISPSQPKQ KVRARRGQAT DPHSIAERLR RERIAERMKA LQELVPNANK TDKASMLDEI 240 IDYVKFLQLQ VKVLSMSRLG GAAAVAPLGA DVSAEGGGEC MQGGRSSNGS GGNQTASSND 300 SVTVTEQQVA RLMEKDMGSA MQYLQGKGLC LMPISLATAI STSTCPSRNP IINGSGGHHP 360 MMGSNGEGPS SPSMSVLTVQ STSMGNGSVK DAASD

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MQPCSREMET LNSLLNNSQI SLQDLHGDDH HLNPPSEQIP GSQLHHFDPV AAASHDDFLE  60
QMLHTIPSCS WPDLNPSNPK SPWDINPINK PSRDISDTSP AAKAAVMLQQ QLLLSRGISS  120
VADHGLPPMP LSLSNADLDR SHNDIVDRSC FRPPNSGGGI QSHSFGAQGN MMNQAPDGGS  180
GGISPSQPKQ KVRARRGQAT DPHSIAERLR RERIAERMKA LQELVPNANK TDKASMLDEI  240
IDYVKFLQLQ VKVLSMSRLG GAAAVAPLGA DVSAEGGGEC MQGGRSSNGS GGNQTASSND  300
SVTVTEQQVA RLMEKDMGSA MQYLQGKGLC LMPISLATAI STSTCPSRNP IINGSGGHHP  360
MMGSNGEGPS SPSMSVLTVQ STSMGNGSVK DAASD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	213	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	7e-67	bHLH family protein