PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933826.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 459aa MW: 50898.7 Da PI: 7.1476

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933826.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.2	6.9e-36	49	191	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_022933826.1 49 LPAGVKFDPTDQELI-EHLEAKVKAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVSRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 141 799**********.99*****5553334444434666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022933826.1 142 ETRWHKTGKTRPVMA-SGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 191 778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MRNSQIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGRPDWVGLP AGVKFDPTDQ 60 ELIEHLEAKV KAKDMKSHPL IDEFIPTIEG EDGICYTHPE KLPGVSRDGL SRHFFHRPSK 120 AYTTGTRKRR KIQTECDLQG GETRWHKTGK TRPVMASGKQ KGCKKILVLY TNFGKNRKPE 180 KTNWVMHQYH LGQHEEEKEG ELVVSKIFYQ TQPRQCNWSD RSLAAAETGF EVVASGSSCS 240 SMAQADEMSP AGGGVGASIS SFSSLDIQHL KSDHFGFGPF RTTSFDEVGM KGRTSGGACS 300 SSGEFELRDH HHQLVVAHND RHRSIVHHHL PTTGFHISNH PSHQISAIIS PPPPPPLLLL 360 DHDSFHHPSP IIIQNQQFHQ QQQQQQQQQE EGESEHHKMG GRSASGLEEL IMGCTSSSSS 420 SIKHHPPESS ISSSREADEW MKYSSFWPES DNPNLHGHG

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MRNSQIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGRPDWVGLP AGVKFDPTDQ  60
ELIEHLEAKV KAKDMKSHPL IDEFIPTIEG EDGICYTHPE KLPGVSRDGL SRHFFHRPSK  120
AYTTGTRKRR KIQTECDLQG GETRWHKTGK TRPVMASGKQ KGCKKILVLY TNFGKNRKPE  180
KTNWVMHQYH LGQHEEEKEG ELVVSKIFYQ TQPRQCNWSD RSLAAAETGF EVVASGSSCS  240
SMAQADEMSP AGGGVGASIS SFSSLDIQHL KSDHFGFGPF RTTSFDEVGM KGRTSGGACS  300
SSGEFELRDH HHQLVVAHND RHRSIVHHHL PTTGFHISNH PSHQISAIIS PPPPPPLLLL  360
DHDSFHHPSP IIIQNQQFHQ QQQQQQQQQE EGESEHHKMG GRSASGLEEL IMGCTSSSSS  420
SIKHHPPESS ISSSREADEW MKYSSFWPES DNPNLHGHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-138	NAC family protein