PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933829.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 454aa MW: 50291.1 Da PI: 7.3142

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933829.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.2	6.7e-36	53	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_022933829.1 53 LPAGVKFDPTDQELI-EHLEAKVKAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVSRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 145 799**********.99*****5553334444434666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022933829.1 146 ETRWHKTGKTRPVMA-SGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 195 778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MRNSQIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGRPRVYQDW VGLPAGVKFD 60 PTDQELIEHL EAKVKAKDMK SHPLIDEFIP TIEGEDGICY THPEKLPGVS RDGLSRHFFH 120 RPSKAYTTGT RKRRKIQTEC DLQGGETRWH KTGKTRPVMA SGKQKGCKKI LVLYTNFGKN 180 RKPEKTNWVM HQYHLGQHEE EKEGELVVSK IFYQTQPRQC NWSDRSLAAA ETGFEVVASG 240 SSCSSMAQAD EMSPAGGGVG ASISSFSSLD IQHLKSDHFG FGPFRTTSFD EVGMKGRTSG 300 GACSSSGEFE LRDHHHQLVV AHNDRHRSIV HHHLPTTGFH ISNHPSHQIS AIISPPPPPP 360 LLLLDHDSFH HPSPIIIQNQ QFHQQEGESE HHKMGGRSAS GLEELIMGCT SSSSSSIKHH 420 PPESSISSSR EADEWMKYSS FWPESDNPNL HGHG

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MRNSQIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGRPRVYQDW VGLPAGVKFD  60
PTDQELIEHL EAKVKAKDMK SHPLIDEFIP TIEGEDGICY THPEKLPGVS RDGLSRHFFH  120
RPSKAYTTGT RKRRKIQTEC DLQGGETRWH KTGKTRPVMA SGKQKGCKKI LVLYTNFGKN  180
RKPEKTNWVM HQYHLGQHEE EKEGELVVSK IFYQTQPRQC NWSDRSLAAA ETGFEVVASG  240
SSCSSMAQAD EMSPAGGGVG ASISSFSSLD IQHLKSDHFG FGPFRTTSFD EVGMKGRTSG  300
GACSSSGEFE LRDHHHQLVV AHNDRHRSIV HHHLPTTGFH ISNHPSHQIS AIISPPPPPP  360
LLLLDHDSFH HPSPIIIQNQ QFHQQEGESE HHKMGGRSAS GLEELIMGCT SSSSSSIKHH  420
PPESSISSSR EADEWMKYSS FWPESDNPNL HGHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-138	NAC family protein