PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933833.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 238aa MW: 26607 Da PI: 7.4575

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933833.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed l+ ++++G+ +W + +r+ g++R++k+c++rw++yl XP_022933833.1 14 RGPWSPQEDATLKAFIHKHGTAgNWIALPRKAGLNRCGKSCRLRWLNYL 62 89****************99***********************97 PP
2	Myb_DNA-binding	43.7	6.5e-14	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T eEd l+ + lG++ W+ Ia+ ++ gRt++++k++w++ XP_022933833.1 69 GGFTLEEDNLICTLYSTLGSR-WAVIASQLP-GRTDNDVKNHWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MGRAPCCDKA TVKRGPWSPQ EDATLKAFIH KHGTAGNWIA LPRKAGLNRC GKSCRLRWLN 60 YLRPDIKHGG FTLEEDNLIC TLYSTLGSRW AVIASQLPGR TDNDVKNHWN TKLKKKFNSF 120 SERPAPTIAA ATQQNAITNM AFPANAPPYS AAADWIRLDE QMDGNLMFAD ANFDFKHDPE 180 DQFPMLWNPQ ELSTSSSNSS LPIEQNQLPF GGNAGEALLS YGFYQYPYGD VMEGLDFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	3e-68	MYB family protein