PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933935.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 424aa MW: 46553.9 Da PI: 4.7333

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933935.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31	4.6e-10	227	274	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022933935.1 227 SHSLAERARREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 274 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MNRALPEMLN TAENCADTLT VLERQRARFK WQQDQLLYQQ QQPFNGMMDY GAGFPPSDHL 60 TGFPGFMSAA GDGGGGGLSL VEMVMGAVKP DPGLEDGWSD PSLLLNPPTA YELNSSLSRT 120 SSCPPAVNPA AAPGRESFKK RKAEKVQKPI NNKEKKIKAS SEEEEEEEEE ELSKTTDQNS 180 TKNNNSTSTT TTTNNNRETS ADTSKASEVK KPDYIHVRAR RGQATDSHSL AERARREKIS 240 ERMKYLQDLV PGCNKITGKA GMLDEIINYV QSLQRQVEFL SMKLAAVNPR LDFNVDDLFL 300 KEVFPPPCTT ATFAAIGGIS SEITDPSSYL QFNPNNQQIV PCCGLELGIN TSDVALRRTI 360 SAPVSFPENF LDSSCLTQFQ GSSGWDVDLQ NLYNVGFDQG RSSNAFSSQP YTGSIEGSNV 420 KMEL

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MNRALPEMLN TAENCADTLT VLERQRARFK WQQDQLLYQQ QQPFNGMMDY GAGFPPSDHL  60
TGFPGFMSAA GDGGGGGLSL VEMVMGAVKP DPGLEDGWSD PSLLLNPPTA YELNSSLSRT  120
SSCPPAVNPA AAPGRESFKK RKAEKVQKPI NNKEKKIKAS SEEEEEEEEE ELSKTTDQNS  180
TKNNNSTSTT TTTNNNRETS ADTSKASEVK KPDYIHVRAR RGQATDSHSL AERARREKIS  240
ERMKYLQDLV PGCNKITGKA GMLDEIINYV QSLQRQVEFL SMKLAAVNPR LDFNVDDLFL  300
KEVFPPPCTT ATFAAIGGIS SEITDPSSYL QFNPNNQQIV PCCGLELGIN TSDVALRRTI  360
SAPVSFPENF LDSSCLTQFQ GSSGWDVDLQ NLYNVGFDQG RSSNAFSSQP YTGSIEGSNV  420
KMEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	9e-61	bHLH family protein