PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934025.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 749aa MW: 83201.7 Da PI: 9.0035

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934025.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.4	3.9e-18	656	738	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W+ +e + Li++r +++ r++ +k +++lWee+s m g++rsp qCk+ w +l ++y++ ++ek ++++py+++++a XP_022934025.1 656 KWKPEEMKRLIKLRGQLHARFQVAKGRMALWEEISTCMLGDGMNRSPGQCKSMWASLVQKYEQDSKREKTI----KKSWPYLEEMDA 738 7**********************************************************9999999875....456*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MGNSSFGFPY TNLRFILYSG VFSSTWCLLV ICGMTVLPWQ LIKKRLKENG IFVPSRLKVF 60 KMRKRFTAGP FEIEPIRVTH SIPDCCGLVL RCADGTILHT GDWKIDESPL DGKVFDRETL 120 EELSKEGVTL MMSDSTNVLS PGRTISESVV ADALLRRISA AKGRVITTQF ASNIHRLGSV 180 KAAADLTGRK LVFVGMSLRT YLEAAWKDGK APIDPSTLVK VEDIEAYAPK DLLIVTTGSQ 240 AEPRAALNLA SYGSSHSLKL SKEDMILYSA KVIPGNESRV MKMLNRISEI GSNIIMGKNE 300 LLHTSGHAYR GELEEILQIV KPQHFLPIHG ELLFLKEHEL LGRSTGIRHT TVIKNGEMLG 360 VSHLRNRRVL SNGFTSLGKE NLQLKYSDGD KAFGSSSELF VDERLKIATD GIIVVSMEIL 420 RPQSIDGLNE TVIKGKLRIT TRCLWLDKGK LLDALHKAAH AALSSCPVNC PLAHMERTVS 480 ELLKKMVRKY SGKRPEVIVL AVENPGGVLS EQLGRRLSGK SDTRFGMSAL RKAVVGQPTK 540 CHLNGIRPDG NDDLHSEDNS SQESQGYYIE PGSLLPEEDY NSSNSNLTET QSSDTEDMED 600 FWTPFITPSS PVNELVKENE GSVQPSKNTL EISNGLKTSN SSEKPLRPLK PVKSNKWKPE 660 EMKRLIKLRG QLHARFQVAK GRMALWEEIS TCMLGDGMNR SPGQCKSMWA SLVQKYEQDS 720 KREKTIKKSW PYLEEMDAIL SDSEAVASK

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MGNSSFGFPY TNLRFILYSG VFSSTWCLLV ICGMTVLPWQ LIKKRLKENG IFVPSRLKVF  60
KMRKRFTAGP FEIEPIRVTH SIPDCCGLVL RCADGTILHT GDWKIDESPL DGKVFDRETL  120
EELSKEGVTL MMSDSTNVLS PGRTISESVV ADALLRRISA AKGRVITTQF ASNIHRLGSV  180
KAAADLTGRK LVFVGMSLRT YLEAAWKDGK APIDPSTLVK VEDIEAYAPK DLLIVTTGSQ  240
AEPRAALNLA SYGSSHSLKL SKEDMILYSA KVIPGNESRV MKMLNRISEI GSNIIMGKNE  300
LLHTSGHAYR GELEEILQIV KPQHFLPIHG ELLFLKEHEL LGRSTGIRHT TVIKNGEMLG  360
VSHLRNRRVL SNGFTSLGKE NLQLKYSDGD KAFGSSSELF VDERLKIATD GIIVVSMEIL  420
RPQSIDGLNE TVIKGKLRIT TRCLWLDKGK LLDALHKAAH AALSSCPVNC PLAHMERTVS  480
ELLKKMVRKY SGKRPEVIVL AVENPGGVLS EQLGRRLSGK SDTRFGMSAL RKAVVGQPTK  540
CHLNGIRPDG NDDLHSEDNS SQESQGYYIE PGSLLPEEDY NSSNSNLTET QSSDTEDMED  600
FWTPFITPSS PVNELVKENE GSVQPSKNTL EISNGLKTSN SSEKPLRPLK PVKSNKWKPE  660
EMKRLIKLRG QLHARFQVAK GRMALWEEIS TCMLGDGMNR SPGQCKSMWA SLVQKYEQDS  720
KREKTIKKSW PYLEEMDAIL SDSEAVASK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein