PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934069.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 253aa MW: 27287.8 Da PI: 9.4074

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934069.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00086	92	114	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H +H XP_022934069.1 92 YQCKTCDRYFPSFQALGGHRASH 114 9***********99999998887 PP
2	zf-C2H2	14	0.00014	168	190	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_022934069.1 168 HECSICGAEFSSGQALGGHMRRH 190 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MAETPDENQA QIMKGKRTKR SRPPSASSAS SAADCSSSSA GLAREGEEDQ DLANCLMLLA 60 QGRTRTGACS SSSSSPVLVR QKLAANQSLF LYQCKTCDRY FPSFQALGGH RASHKKPKFN 120 NIVNTSVPQP HFTPSDSIQL SLQLSTTSRP PPPPPPAAVN DLIKPKVHEC SICGAEFSSG 180 QALGGHMRRH RALTANPTRG ATTTTTPQLQ DLMSKKKRNM LELDLNLPAP EEDRHRPPVA 240 VFSGASPLVD CHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	3e-42	C2H2 family protein