PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934231.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 254aa    MW: 28306.1 Da    PI: 10.5102
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934231.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.9e-165398147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ed +l+++v+ +G+ +W++Ia+ +  gR++k+c++rw++ 
   XP_022934231.1 53 RGHWRPAEDAKLKELVAHYGPQNWNLIAENLR-GRSGKSCRLRWFNQ 98
                     899*****************************.***********996 PP
2Myb_DNA-binding54.33e-17107148346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++ +eE+e+lv a++++G++ W+ Iar ++ gRt++ +k++w+ 
   XP_022934231.1 107 AFNEEEEERLVTAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 148
                      799*****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MNLPPFNHAF PGNGLLQNPA LMPPLPPPLP CTDGTAIVTK NNAPHRHTKL CARGHWRPAE  60
DAKLKELVAH YGPQNWNLIA ENLRGRSGKS CRLRWFNQLD PRINRAAFNE EEEERLVTAH  120
RLYGNKWAMI ARLFPGRTDN AVKNHWHVIM ARKQRRSLRK IFQKNNVSGE STISSTASTS  180
AASRWCGGIG KVWGKTEEAM TAEQSGNSES NSDVSAAESV ISTNLCLSSG WGNGRRRQDH  240
MKMEFIDFLG VGAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17800.12e-61MYB family protein