PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934248.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 305aa    MW: 34687.3 Da    PI: 4.8181
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934248.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.8e-1970118355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  XP_022934248.1  70 YRGIRQRP-WGKWAAEIRDPRK---GIRVWLGTFNTAEEAARAYDREARKIRG 118
                     9*******.**********954...3************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MCGGAFIAGF IPRRDGQRVT ASDIWPNSPL FDFNKCPPDH DASPVKRPLR SSEASWTDEK  60
PKKRQRKNLY RGIRQRPWGK WAAEIRDPRK GIRVWLGTFN TAEEAARAYD REARKIRGKK  120
AKVNFPNEDD EFSIQARCNL QNANPQFHTQ IRANNLHSVP ENSVYGEFCW DRNQIGNFMA  180
KDFNGSRIPA VIEEQSASGS ENSYSPPERS DVYQNVNAVE FGVEEAEEKP EEKVAIVATT  240
EEENEVQKLS EELMAYENFM KFYQIPYLDG QSTVTNPAEE QVVGDLWSFD DDDGGLHGSV  300
SSNEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.16e-33ERF family protein