PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934317.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 475aa    MW: 51701.9 Da    PI: 7.4921
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934317.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.43.1e-33169225259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers  d++++ei+Y+g+Hnh 
  XP_022934317.1 169 NDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGSHNHA 225
                     7****************************************.***************7 PP
2WRKY105.92e-33318375259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      Dgy+WrKYGqK+vkg+++prsYY+Cts gCpv+k++er+a+d+++v++tYeg+Hnhe
  XP_022934317.1 318 PDGYRWRKYGQKVVKGNPNPRSYYKCTSLGCPVRKHIERAANDTRAVITTYEGKHNHE 375
                     6********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MNNINQSVNT VAGGSCEKRT NGLGMEAPKF KSLQPPPFPM SPSSYLSAFS SGLSPTELLN  60
SPLFSFGLFP SPTTGSFNLR NDYDDADHQE MKADLKNYSN SSFNPQTRSS VSSYFQSSSS  120
NVTLLNPGGL SCDESGAKSE VVATDMAAAQ SNPVSQLPVY NREQKKSEND GYNWRKYGQK  180
QVKGSENPRS YYKCTFPNCP TKKKVERSLD GQITEIVYKG SHNHAKPQPT RRSGNSAVYD  240
PSAAESTLLL EDSSVSVGDD EVEPNSPFSN SVDDNENEPE SKRWKGENEN EGFSGGGSRT  300
VKEPRIVVQT TSEIDILPDG YRWRKYGQKV VKGNPNPRSY YKCTSLGCPV RKHIERAAND  360
TRAVITTYEG KHNHEVPAAR GGGGSFYNAV NRPVPANIPM PVRPSAAVSH SFPTNFPATF  420
LAGNINMSEI GARAASSSFP FQTSQGVPPS FQVSGFGTAA KEEAEDNMFF NSFLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-108WRKY family protein