PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934435.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 286aa    MW: 32323 Da    PI: 4.6573
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934435.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.53.5e-2169122356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t++q++ Le+ F +++++  e++ +LAkklgL+ rqV vWFqNrRa++k
  XP_022934435.1  69 KKRRLTHDQVQMLEKSFDEDNKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 122
                     56789************************************************9 PP
2HD-ZIP_I/II131.82.6e-4268160193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrl+++qv++LE+sF+e++kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd l ++ +++ ke+++L++++++
  XP_022934435.1  68 EKKRRLTHDQVQMLEKSFDEDNKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLLSNYDSVIKENADLKSQVAS 160
                     69**************************************************************************************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MESGRFLFNP PPCGGNMLYL GGAGGDPVLR GGRTMMSMTM HESPKGRPFF RSPDDLYDDE  60
YYDEFYPEKK RRLTHDQVQM LEKSFDEDNK LEPERKSQLA KKLGLQPRQV AVWFQNRRAR  120
WKTKQLERDY DVLKASYDLL LSNYDSVIKE NADLKSQVAS LTEKCLAKEL DGGGEAPIPC  180
VTSEPLLADI GHVSAPHSSR KAEDRLSSGS DDSTVIDDNC RQLTDCCDSY FPSNEYLQCA  240
PLPNGLQMEH DDSNNNSNYL FSDMFAVTGQ QNQEGLGGPP AWWTWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117125RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.11e-78HD-ZIP family protein