PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934500.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 1002aa MW: 110494 Da PI: 6.0847

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934500.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.2	3.6e-41	155	232	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+akeyhrrhkvCe+hska+++lv+++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk ++ XP_022934500.1 155 VCQVEDCGADLSNAKEYHRRHKVCETHSKASNALVANVLQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINP 232 6**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1002 aa Download sequence
MEAGYGGEAC QLYGMSSMDL RAAVGKRSLE WDLNDWKWDG DLFIATPLNT VESDHLNRQL 60 FPIVSGIPLT TGGSSNSSSS CSDEANMGIE KGKREVEKRR RISGIEDENL NDEARSLSLK 120 IGGNVSQIVE RDAGSWEGSS GKKSKLGGGA SNRAVCQVED CGADLSNAKE YHRRHKVCET 180 HSKASNALVA NVLQRFCQQC SRFHVLQEFD EGKRSCRRRL AGHNKRRRKI NPDTVVNGNS 240 PPDEQTSSYL LLTLLRILAN LNSNGSNQTT DQDLLSHLIR TLACQSSEHG GKNLTGILHE 300 PQKLLNNGAL IGKSDLVSTF LSNGPPVPLR SSKQHDTIPI SEAPVQAIGR GGDTPAVSCI 360 KPSTSNSPPA YSEIRDSQVG QCKMMNFDLN DAYVDSDDGM EDIERQALPV HMGTSSLECP 420 SWVQQDSHQS SPPQTSGNSD SASAQSPSSS AGEAQSRTDR IILKLFGKAP NDFPHVLRAQ 480 VLDWLSHSPT EIESYIRPGC VVLTVYTRQT EAAWDDLCHD LSTSFNSLFD VSDDAFWRTG 540 WVYVRVQHQI AFVYQGRVVV DTSLPLRNKN YCRITSVNPV AVSTSKKAIF SVKGRNLRQP 600 TTRLLCAIEG KYLTQEASDE PTECDDNSNA QDDSRCITFS CSIPVVYGRG FIEVEDDGFS 660 SSFFPFIVAE EDVCSEICTL QSALELTETC SNSGETEELE GRSNAMEFIH EIGWLFHRNQ 720 LKSRLGDLDP NENLFSLPRF KWLMEFAMDH DWCAVVKKLL DVLLDGTVDA GGHSSLNLAL 780 MDMSLLHRAV RKNSRSLVEL LLVYPSKVKD TSSADSFLFR PNVVGPAGLT PLHIAAGKDD 840 SEDVLDALTN DPGMVGVEAW KSARDSTGST PEDYARLRGH YSYIRLVQRK INKRSAAAEH 900 VVVEIPPSSV SDGRWNEKQN TDMSSSRFEI GRTEVKHCRQ CVRKPVRCGT SSSASLVYRP 960 AMLSMVAIAA VCVCVALLFK SSPEVLYVFR PFRWELLDYG TS

Sequence ? help Back to Top

Protein Sequence Length: 1002 aa Download sequence

MEAGYGGEAC QLYGMSSMDL RAAVGKRSLE WDLNDWKWDG DLFIATPLNT VESDHLNRQL  60
FPIVSGIPLT TGGSSNSSSS CSDEANMGIE KGKREVEKRR RISGIEDENL NDEARSLSLK  120
IGGNVSQIVE RDAGSWEGSS GKKSKLGGGA SNRAVCQVED CGADLSNAKE YHRRHKVCET  180
HSKASNALVA NVLQRFCQQC SRFHVLQEFD EGKRSCRRRL AGHNKRRRKI NPDTVVNGNS  240
PPDEQTSSYL LLTLLRILAN LNSNGSNQTT DQDLLSHLIR TLACQSSEHG GKNLTGILHE  300
PQKLLNNGAL IGKSDLVSTF LSNGPPVPLR SSKQHDTIPI SEAPVQAIGR GGDTPAVSCI  360
KPSTSNSPPA YSEIRDSQVG QCKMMNFDLN DAYVDSDDGM EDIERQALPV HMGTSSLECP  420
SWVQQDSHQS SPPQTSGNSD SASAQSPSSS AGEAQSRTDR IILKLFGKAP NDFPHVLRAQ  480
VLDWLSHSPT EIESYIRPGC VVLTVYTRQT EAAWDDLCHD LSTSFNSLFD VSDDAFWRTG  540
WVYVRVQHQI AFVYQGRVVV DTSLPLRNKN YCRITSVNPV AVSTSKKAIF SVKGRNLRQP  600
TTRLLCAIEG KYLTQEASDE PTECDDNSNA QDDSRCITFS CSIPVVYGRG FIEVEDDGFS  660
SSFFPFIVAE EDVCSEICTL QSALELTETC SNSGETEELE GRSNAMEFIH EIGWLFHRNQ  720
LKSRLGDLDP NENLFSLPRF KWLMEFAMDH DWCAVVKKLL DVLLDGTVDA GGHSSLNLAL  780
MDMSLLHRAV RKNSRSLVEL LLVYPSKVKD TSSADSFLFR PNVVGPAGLT PLHIAAGKDD  840
SEDVLDALTN DPGMVGVEAW KSARDSTGST PEDYARLRGH YSYIRLVQRK INKRSAAAEH  900
VVVEIPPSSV SDGRWNEKQN TDMSSSRFEI GRTEVKHCRQ CVRKPVRCGT SSSASLVYRP  960
AMLSMVAIAA VCVCVALLFK SSPEVLYVFR PFRWELLDYG TS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	102	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein