PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934620.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 357aa MW: 41467.5 Da PI: 4.3694

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934620.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	63	9.1e-20	37	165	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lp G+ F Ptd+el ++yL++k+ g++++ v++ vd+y+ eP+ L + +++ ++ F++ +kk+++ rk + g+W+ +++s XP_022934620.1 37 LPLGYVFCPTDQELFQFYLHHKIVGNDTPY--VLPVVDLYSEEPSVLWQnYGGIDDQYLHVFTQLKKKKSRVIRKVG-SNGGTWSGESAAVKIFS 128 689**********************998..8**********751444477788999999998876555555.478********** PP NAM 95 k..kgelvglkktLvfy.kgrapkgektdWvmheyrl 128 + ++ l g+ k + + ++ +++ e+++W+mhey++ XP_022934620.1 129 SddNHILLGTLKRFHYEnRKVEKSNENCSWIMHEYTI 165 954555588888888874345566689******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MACPDLQSSI HYNCGFLPNF RLQLLPRIMA TAALNQLPLG YVFCPTDQEL FQFYLHHKIV 60 GNDTPYVLPV VDLYSEEPSV LWQNYGGIDD QYLHVFTQLK KKKSRVIRKV GSNGGTWSGE 120 SAAVKIFSSD DNHILLGTLK RFHYENRKVE KSNENCSWIM HEYTINPDLV PNGNVHDRFV 180 FCKIRHKILY YRREDQAPIS TEAIQVYEQA IANPEEETFK INEQFHGELM NPISNETIQV 240 HEQAIAYPEE ETFKIKEQFH GELMNPISTE TIQVHEQAIA NLEEETFQID EQSLRELMNS 300 ISTESIKIHA QAEDSNEEQM FEINEQFFEE LDDPLEDIDF SCMNDDLSLL DDLPLPW

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MACPDLQSSI HYNCGFLPNF RLQLLPRIMA TAALNQLPLG YVFCPTDQEL FQFYLHHKIV  60
GNDTPYVLPV VDLYSEEPSV LWQNYGGIDD QYLHVFTQLK KKKSRVIRKV GSNGGTWSGE  120
SAAVKIFSSD DNHILLGTLK RFHYENRKVE KSNENCSWIM HEYTINPDLV PNGNVHDRFV  180
FCKIRHKILY YRREDQAPIS TEAIQVYEQA IANPEEETFK INEQFHGELM NPISNETIQV  240
HEQAIAYPEE ETFKIKEQFH GELMNPISTE TIQVHEQAIA NLEEETFQID EQSLRELMNS  300
ISTESIKIHA QAEDSNEEQM FEINEQFFEE LDDPLEDIDF SCMNDDLSLL DDLPLPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46590.1	1e-12	NAC family protein