PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934712.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 248aa    MW: 28255.2 Da    PI: 10.4481
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934712.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.18.5e-184794148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l+ +++q+G g+W+t + + g+ R++k+c++rw +yl
   XP_022934712.1 47 KGPWTPEEDHKLLAYIQQHGHGSWRTLPPKAGLERCGKSCRLRWTNYL 94
                     79********************************************97 PP
2Myb_DNA-binding53.45.9e-17100145148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++  E++ +v+++++lG++ W++Ia +++ +Rt++++k++w++++
   XP_022934712.1 100 RGKFSLHEEQAIVQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHM 145
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MLHFVRFAQL MLPHLKHKAV SSVIKQRTGC YIQMGTSPRR HKSGLKKGPW TPEEDHKLLA  60
YIQQHGHGSW RTLPPKAGLE RCGKSCRLRW TNYLRPDIKR GKFSLHEEQA IVQLHALLGN  120
RWSAIATHLP KRTDNEIKNY WNTHMKKKLI KMGIDPITHK PIKNNEEQNN MNSTLTHMAQ  180
WETARLEAEE RLARQSKLQP IPSANQNPYG SSGGEESPTT SSTAAGGDQL PSSDSKNNWW  240
DTILGGEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.18e-84MYB family protein