PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934720.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 380aa MW: 41839.4 Da PI: 7.5207

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934720.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	194	247	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022934720.1 194 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 247 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	195	246	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022934720.1 195 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 246 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS SIRTLSHGFA QTSFDLLIQR 60 NDPRAHTELS LGTNNNNNNN SLSGVPLNNP TPPPRLRGLS MFDISSDGLQ PIKGIPVYHN 120 RPFSFLGVDQ KDHYFHHQFP SSCFFPNYSN SNGVVQMGYH HHRGIGGNNS SPRFNNGVVS 180 IEAKLPAKRS MRAPRMRWTT SLHARFVHAV EHLGGHERAT PKSVLELMDV KDLTLAHVKS 240 HLQMYRTVKT TDKPAASSGQ SDGSGEDEVS PTLGTISGGH GPKQFSDQRA PPDRSGQQSP 300 DLEFGSSTLW SNSSRDVWAE TNGNEMDVIR PSLYAKMQQK CMHQIQECDS GAMKKYNSEC 360 CNKPSLEFRL GRAEWDVEEH

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS SIRTLSHGFA QTSFDLLIQR  60
NDPRAHTELS LGTNNNNNNN SLSGVPLNNP TPPPRLRGLS MFDISSDGLQ PIKGIPVYHN  120
RPFSFLGVDQ KDHYFHHQFP SSCFFPNYSN SNGVVQMGYH HHRGIGGNNS SPRFNNGVVS  180
IEAKLPAKRS MRAPRMRWTT SLHARFVHAV EHLGGHERAT PKSVLELMDV KDLTLAHVKS  240
HLQMYRTVKT TDKPAASSGQ SDGSGEDEVS PTLGTISGGH GPKQFSDQRA PPDRSGQQSP  300
DLEFGSSTLW SNSSRDVWAE TNGNEMDVIR PSLYAKMQQK CMHQIQECDS GAMKKYNSEC  360
CNKPSLEFRL GRAEWDVEEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	4e-53	G2-like family protein