PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934722.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 373aa MW: 41196.8 Da PI: 7.7605

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934722.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	187	240	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022934722.1 187 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 240 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.8e-15	188	239	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022934722.1 188 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 239 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS SIRTLSHGFA QTSFDLLIQR 60 NDPRAHTELS LGTNNNNNNN SLSGVPLNNP TPPPRLRGLS MFDISSDGLQ PIKGIPVYHN 120 RPFSFLGVDQ KDHYFHHQFP SSCFFPNYSN SNGVVQMGYH HHRGIGGNNS SPRFLQKLPA 180 KRSMRAPRMR WTTSLHARFV HAVEHLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT 240 VKTTDKPAAS SGQSDGSGED EVSPTLGTIS GGHGPKQFSD QRAPPDRSGQ QSPDLEFGSS 300 TLWSNSSRDV WAETNGNEMD VIRPSLYAKM QQKCMHQIQE CDSGAMKKYN SECCNKPSLE 360 FRLGRAEWDV EEH

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS SIRTLSHGFA QTSFDLLIQR  60
NDPRAHTELS LGTNNNNNNN SLSGVPLNNP TPPPRLRGLS MFDISSDGLQ PIKGIPVYHN  120
RPFSFLGVDQ KDHYFHHQFP SSCFFPNYSN SNGVVQMGYH HHRGIGGNNS SPRFLQKLPA  180
KRSMRAPRMR WTTSLHARFV HAVEHLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT  240
VKTTDKPAAS SGQSDGSGED EVSPTLGTIS GGHGPKQFSD QRAPPDRSGQ QSPDLEFGSS  300
TLWSNSSRDV WAETNGNEMD VIRPSLYAKM QQKCMHQIQE CDSGAMKKYN SECCNKPSLE  360
FRLGRAEWDV EEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	5e-45	G2-like family protein